Beth Israel Deaconess Medical Center · Harvard Medical School
Single-cell and spatial tissue profiling.
A Center of Excellence turning research-grade spatial and single-cell technologies into robust, automated, repeatable services - from sample to data.
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Serving Academia, Nonprofits, and Industry - including clinical trials and correlative work.
Platforms and services
Imaging- and sequencing-based spatial transcriptomics and proteomics, single-cell and single-nucleus profiling, super-resolution microscopy, and tissue microarray construction - run as vetted, priced services.
GEM-X 3'/5'
Droplet single-cell and single-nucleus whole-transcriptome RNA-seq.
Flex
Droplet single cell and single nucleus RNA-seq with high throughput.
Xenium
Sub-cellular spatial transcriptomics; panels to 1,000 genes.
StrataMap
Illumina sequencing-based spatial transcriptomics.
G4X
RNA, protein and H&E from a single section.
All platforms
Spatial
Single cell & single nucleus
Supportive
Certifications and firsts
Personnel and workflows to good clinical laboratory practice.
Certified provider for Chromium, Xenium and Visium.
Spatial Sequencing Center of Excellence.
First MERSCOPE to leave the Vizgen factory; first G4X globally.
First location in the US to offer single nucleus RNA-seq from FFPE samples, since August 2022.
Who we work with
The unit supports investigators across Academia, Nonprofits, and Industry - from a single exploratory section to multi-site consortium programs, including clinical trials and correlative studies. Projects begin on sample receipt, and internal, external-academic, and industry clients have equal priority. Long-term partners can establish tailored services, dedicated capacity, and cost reductions through a strategic alliance.
From sample to data
Sample QC, assay, imaging or sequencing, data processing, quality control, transfer, and retention are handled within the unit. See the technologies for what each platform delivers, or estimate a project.